1- Symmetry Elements and Operations

2- Operator Properties and Mathematical Groups

3- Similarity Transforms, Classes and Representations

4- Characters and Character Tables

5- Molecular Point Groups I

6- Molecular Point Groups II 

7- LCAO and Hückel Theory I

8- Hückel Theory II

9- N-Dimensional Cyclic Systems

10- From Molecular Orbitals to Bands

11- Band Theory

12- Frontier Molecular Orbitals: σ Ligands

13- Frontier Molecular Orbitals: π Ligands

14- ML₆ σ Complexes

15- Angular Overlap Method and M-L Diatomics

1- Symmetry Elements and Operations

(PDF)

2- Operator Properties and Mathematical Groups

(PDF)

3- Similarity Transforms, Classes and Representations

(PDF)

4- Characters and Character Tables

(PDF)

5- Molecular Point Groups I

(PDF)

6- Molecular Point Groups II

(PDF)

7- LCAO and Hückel Theory I

 (PDF)

8- Hückel Theory II

  (PDF)

9- N-Dimensional Cyclic Systems

(PDF)

10- From Molecular Orbitals to Bands

(PDF)

11- Frontier Molecular Orbitals: σ Ligands

(PDF)

12- Angular Overlap Method and M-L Diatomics

 (PDF)

13- AOM for MLn Ligand Fields

(PDF)

14-Spectrochemical Series (O_h) / Descent in Symmetry

 (PDF)

15-Multiply Bonded Metal-Ligand Complexes

(PDF)

16- Sandwich Compounds

(PDF)

17- Bent Cp Complexes

1- Problem set1

(PDF)

2- Problem set2

(PDF)

3- Problem set3

(PDF)

4- Problem set4

(PDF)

5- Problem set5

 (PDF)

6- Problem set6

(PDF)

7- Problem set7

(PDF)

1- Introduction and Theory

2- Aluminum Chemistry I

3- Aluminum II

4- Phosphorus

5- Gallium and Indium

6- Gallium Multiple Bonds

7- Gallium, Phosphorus, and Tin

8- Nitrogen, Halogens, Noble Gases

9- Fluorine, Krypton

10- Relativistic Effects

11-Gold, Fluorine, Xenon

1- Aluminum Chemistry I

(PDF)

2- Aluminum II

(PDF)

3- Phosphorus

(PDF)

4-Gallium Multiple Bonds

(PDF)

5-Gallium, Phosphorus, and Tin

(PDF)

6- Relativistic Effects

(PDF)

7-Fluorine, Krypton

 (PDF)

1- Choose molecule and model from Robinson's work

2- Optimize geom. and get wavefunction

3- Gaussian or ADF output => DGrid data in "Gaussian Cube Format"

4- Visualize and analyze => VRML as output

- RNAse and the Development of Modern Protein Biochemistry

- Moore, Stanford, and William H. Stein. "Chemical Structures of Pancreatic Ribonuclease and Deoxyribonuclease." Science 180 (4 May 1973): 458-464.

- Refolding of Denatured RNAse In Vitro

- Sela, M., F. H. White Jr., and C. B. Anfinsen. "Reductive Cleavage of Disulfide Bridges in Ribonuclease." Science 125 (1957): 691-692.

- White, Frederick H. "Regeneration of Native Secondary and Tertiary Structures by Air Oxidation of Reduced Ribonuclease." J. Biol. Chem. 236 (1961): 1353-1360.

- Anfinsen, C. B., and Edgar Haber. "Studies on the Reduction and Re-formation of Protein Disulfide Bonds." J. Biol. Chem. 236 (1960): 1361-1363.

- Anfinsen, C. B., Edgar Haber, M. Sela, and F. H. White, Jr. "The Kinetics of Formation of Native Ribonuculease During Oxidation of the Reduced Polypeptide Chain." PNAS 47 (1961): 1309-1314.

- Folding of Coiled Coils List

- Lehrer, Sherwin S., and Amy Yuan. "The Stability of Tropomyosin at Acid pH: Effects of Anion Binding." J. Structural Biology 122 (1998): 176-179.

- Lehrer, Sherwin S., Yude Qian, and Soren Hvidt. "Assembly of the Native heterodimer of Rana Esculenta Tropomyosin by Chain Exchange." Science 246 (1989): 926-928.

- Suarez, Marisa C., Sherwin S. Lehrer, and Jerson L. Silva. "Local Heterogeneity in the Pressure Denaturation of the Coiled-coil Tropomyosin because of Subdomain Folding Units." Biochemistry 40 (2001): 1300-1307.

1- Introduction to the Problem 

(PDF)

2- The Anfinsen Experiments

(PDF)

3- Packing of Secondary Structures - JK

(PDF)

4- Packing of Secondary Structures: Beta-sheets and Beta-sheet Packing

(PDF)

5- Coiled Coils (Fully Illustrated)

(PDF)

6- S-peptide Helical Folding 

(PDF)

7- S-peptide Helical Folding, (cont.)

 (PDF)

8- Detecting Folding Intermediates

 (PDF)

7- Cytochrome Refolding

 (PDF)